Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP54 ENSECAG00000013079

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Description

ubiquitin specific peptidase 54 [Source:VGNC Symbol;Acc:VGNC:24853]

Location

Primary_assembly 1: 61,727,686-61,841,490 reverse strand.

EquCab3.0:CM009148.1

About this gene

This gene has 9 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000013867.3	USP54-202	6570	1691aa	ENSECAP00000011037.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6ZVA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000133667.1	USP54-207	8531	819aa	ENSECAP00000064078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RQH0	-
ENSECAT00000089005.1	USP54-208	7002	1615aa	ENSECAP00000077524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SU62	-
ENSECAT00000098392.1	USP54-209	6882	1575aa	ENSECAP00000067431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RXV4	-
ENSECAT00000092718.1	USP54-203	6399	1634aa	ENSECAP00000083005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T9N1	-
ENSECAT00000079707.1	USP54-204	6309	1604aa	ENSECAP00000089357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TRR0	-
ENSECAT00000113976.1	USP54-206	6252	837aa	ENSECAP00000056203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R197	-
ENSECAT00000035749.3	USP54-205	6126	1526aa	ENSECAP00000040649.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HYX2	-
ENSECAT00000086058.1	USP54-201	4991	1419aa	ENSECAP00000070407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S693	-

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Summary

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