Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHANK1 ENSECAG00000029466

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Description

SH3 and multiple ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:HGNC:15474]

Location

Primary_assembly 10: 20,409,214-20,454,191 reverse strand.

EquCab3.0:CM009157.1

About this gene

This gene has 3 transcripts (splice variants), 265 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000071795.2	SHANK1-201	7961	2170aa	ENSECAP00000054194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5Q0Z6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000070591.2	SHANK1-202	7937	2162aa	ENSECAP00000050306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PQ06	-
ENSECAT00000039304.3	SHANK1-203	7934	2162aa	ENSECAP00000041070.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I0G9	-

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Summary

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