Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USH1C ENSECAG00000024745

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Description

USH1 protein network component harmonin [Source:VGNC Symbol;Acc:VGNC:24825]

Location

Primary_assembly 7: 87,969,101-88,016,800 reverse strand.

EquCab3.0:CM009154.1

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000026767.4	USH1C-201	3221	859aa	ENSECAP00000022363.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R517	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000060350.3	USH1C-202	2297	551aa	ENSECAP00000028075.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H3B5	-
ENSECAT00000067191.2	USH1C-203	2240	532aa	ENSECAP00000055247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5Q4W9	-
ENSECAT00000051683.2	USH1C-204	2158	562aa	ENSECAP00000046582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IDS7	-
ENSECAT00000117357.1	USH1C-205	1585	523aa	ENSECAP00000085578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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