Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP42 ENSECAG00000021875

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Description

ubiquitin specific peptidase 42 [Source:VGNC Symbol;Acc:VGNC:49363]

Location

Primary_assembly 13: 5,243,207-5,282,324 reverse strand.

EquCab3.0:CM009160.1

About this gene

This gene has 5 transcripts (splice variants), 237 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000023491.3	USP42-202	4354	1404aa	ENSECAP00000019461.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YEW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000139366.1	USP42-205	5354	186aa	ENSECAP00000087566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TLS3	-
ENSECAT00000033031.3	USP42-203	5157	1333aa	ENSECAP00000039445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HY82	-
ENSECAT00000064579.3	USP42-204	5070	1304aa	ENSECAP00000046491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IE64	-
ENSECAT00000104921.1	USP42-201	3834	160aa	ENSECAP00000056638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R2G5	-

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Summary

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