Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LRRC40 ENSECAG00000019554

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Description

leucine rich repeat containing 40 [Source:VGNC Symbol;Acc:VGNC:58668]

Location

Primary_assembly 5: 88,498,844-88,549,531 forward strand.

EquCab3.0:CM009152.1

About this gene

This gene has 6 transcripts (splice variants), 205 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000020999.4	LRRC40-204	4219	602aa	ENSECAP00000017271.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CGH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000097308.1	LRRC40-206	4408	574aa	ENSECAP00000079792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000021004.4	LRRC40-205	4111	566aa	ENSECAP00000017276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CGE1	-
ENSECAT00000081722.1	LRRC40-202	3168	219aa	ENSECAP00000082313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000086731.1	LRRC40-203	3012	180aa	ENSECAP00000083038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000054847.2	LRRC40-201	2133	568aa	ENSECAP00000023149.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GRQ6	-

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Summary

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