Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP40 ENSECAG00000013493

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Description

ubiquitin specific peptidase 40 [Source:VGNC Symbol;Acc:VGNC:52458]

Location

Primary_assembly 6: 20,274,980-20,372,525 reverse strand.

EquCab3.0:CM009153.1

About this gene

This gene has 9 transcripts (splice variants), 193 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000045334.2	USP40-209	4911	1236aa	ENSECAP00000040225.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LH41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000040038.2	USP40-207	11385	1178aa	ENSECAP00000037933.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HUH6	-
ENSECAT00000014364.4	USP40-206	8405	1152aa	ENSECAP00000011479.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BBB6	-
ENSECAT00000046612.2	USP40-208	5473	1193aa	ENSECAP00000041540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I300	-
ENSECAT00000042160.2	USP40-201	4793	1211aa	ENSECAP00000036443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HQX2	-
ENSECAT00000050699.2	USP40-202	4760	1200aa	ENSECAP00000027746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H401	-
ENSECAT00000047076.2	USP40-203	4724	1188aa	ENSECAP00000045366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IAS7	-
ENSECAT00000037238.2	USP40-204	4667	1169aa	ENSECAP00000042637.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I5Q2	-
ENSECAT00000035457.2	USP40-205	4595	1145aa	ENSECAP00000044846.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I9F1	-

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Summary

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