Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPECC1 ENSECAG00000008538

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Description

sperm antigen with calponin homology and coiled-coil domains 1 [Source:VGNC Symbol;Acc:VGNC:23510]

Location

Primary_assembly 11: 58,628,152-58,912,644 reverse strand.

EquCab3.0:CM009158.1

About this gene

This gene has 9 transcripts (splice variants), 216 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000028945.4	SPECC1-207	3772	1108aa	ENSECAP00000022823.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R9E6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000107938.1	SPECC1-201	6628	1048aa	ENSECAP00000072987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000056152.2	SPECC1-209	4559	1078aa	ENSECAP00000035666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HLT9	-
ENSECAT00000035254.3	SPECC1-206	3945	987aa	ENSECAP00000046325.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IEL7	-
ENSECAT00000057531.2	SPECC1-203	3786	970aa	ENSECAP00000023839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GU57	-
ENSECAT00000038358.2	SPECC1-202	3703	982aa	ENSECAP00000025123.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GWC6	-
ENSECAT00000037048.3	SPECC1-208	3612	1029aa	ENSECAP00000024468.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GUT4	-
ENSECAT00000041160.3	SPECC1-204	3517	976aa	ENSECAP00000039186.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HV43	-
ENSECAT00000058766.2	SPECC1-205	3192	873aa	ENSECAP00000043984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I963	-

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Summary

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