Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OTX1 ENSECAG00000024462

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Description

orthodenticle homeobox 1 [Source:VGNC Symbol;Acc:VGNC:21094]

Location

Primary_assembly 15: 39,402,292-39,409,281 reverse strand.

EquCab3.0:CM009162.1

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000052422.3	OTX1-201	2975	412aa	ENSECAP00000046203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IKT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000128576.1	OTX1-202	2815	355aa	ENSECAP00000071343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S905	-

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Gene tree

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