Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SF3A1 ENSECAG00000023962

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Description

splicing factor 3a subunit 1 [Source:VGNC Symbol;Acc:VGNC:22886]

Location

Primary_assembly 8: 8,833,968-8,853,366 forward strand.

EquCab3.0:CM009155.1

About this gene

This gene has 4 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000125810.1	SF3A1-204	3672	780aa	ENSECAP00000061149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RE97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000143795.1	SF3A1-202	3452	670aa	ENSECAP00000072290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SE61	-
ENSECAT00000025874.3	SF3A1-203	3037	769aa	ENSECAP00000021544.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Y642	-
ENSECAT00000146725.1	SF3A1-201	2819	751aa	ENSECAP00000085360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TAP9	-

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Gene tree

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