Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NPAS3 ENSECAG00000021888

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Description

neuronal PAS domain protein 3 [Source:UniProtKB Gene Name;Acc:A0A3Q2HL78]

Location

Primary_assembly 1: 172,006,110-172,834,683 forward strand.

EquCab3.0:CM009148.1

About this gene

This gene has 8 transcripts (splice variants), 204 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000055851.3	NPAS3-207	5145	980aa	ENSECAP00000034399.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HIB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000107585.1	NPAS3-205	9746	899aa	ENSECAP00000070516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S6P4	-
ENSECAT00000042709.3	NPAS3-208	5673	962aa	ENSECAP00000040831.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LI88	-
ENSECAT00000064295.2	NPAS3-206	5650	977aa	ENSECAP00000029012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2KX08	-
ENSECAT00000114326.1	NPAS3-202	5484	153aa	ENSECAP00000069352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S3A5	-
ENSECAT00000062092.2	NPAS3-203	5248	929aa	ENSECAP00000035434.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HL78	-
ENSECAT00000023307.4	NPAS3-201	5034	844aa	ENSECAP00000019295.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XTQ9	-
ENSECAT00000037773.3	NPAS3-204	4733	906aa	ENSECAP00000027775.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H2L3	-

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Gene tree

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