Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBP1 ENSECAG00000018555

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Description

upstream binding protein 1 [Source:VGNC Symbol;Acc:VGNC:56858]

Location

Primary_assembly 16: 52,485,401-52,538,398 forward strand.

EquCab3.0:CM009163.1

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000020260.3	UBP1-202	3658	540aa	ENSECAP00000016622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B4V0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000053839.2	UBP1-203	3550	504aa	ENSECAP00000024123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2KLX4	-
ENSECAT00000083278.1	UBP1-201	3095	164aa	ENSECAP00000070238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S7W6	-

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Gene tree

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