Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG16L1 ENSECAG00000016091

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Description

autophagy related 16 like 1 [Source:VGNC Symbol;Acc:VGNC:56535]

Location

Primary_assembly 6: 20,082,222-20,119,810 forward strand.

EquCab3.0:CM009153.1

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000049438.2	ATG16L1-203	3456	624aa	ENSECAP00000031326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HDM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000017327.3	ATG16L1-204	3405	607aa	ENSECAP00000014070.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XCU4	-
ENSECAT00000015852.4	ATG16L1-205	3399	605aa	ENSECAP00000012776.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7C439	-
ENSECAT00000052074.3	ATG16L1-201	3381	607aa	ENSECAP00000030558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H974	-
ENSECAT00000045878.3	ATG16L1-206	3339	585aa	ENSECAP00000036636.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HTP8	-
ENSECAT00000031872.3	ATG16L1-202	2892	444aa	ENSECAP00000043206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I5C0	-

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Gene tree

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