Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AFF3 ENSECAG00000006249

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Description

ALF transcription elongation factor 3 [Source:VGNC Symbol;Acc:VGNC:112298]

Location

Primary_assembly 15: 9,498,680-10,070,046 forward strand.

EquCab3.0:CM009162.1

About this gene

This gene has 6 transcripts (splice variants), 197 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000121642.1	AFF3-205	5040	1269aa	ENSECAP00000083683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T9B4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000091716.1	AFF3-204	4941	1244aa	ENSECAP00000057556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R728	-
ENSECAT00000033003.2	AFF3-206	4927	1226aa	ENSECAP00000031613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L278	-
ENSECAT00000058562.3	AFF3-203	4911	1251aa	ENSECAP00000023235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GS02	-
ENSECAT00000006275.3	AFF3-201	4673	1121aa	ENSECAP00000004431.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7AAF3	-
ENSECAT00000107811.1	AFF3-202	4607	1175aa	ENSECAP00000064508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RP27	-

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Gene tree

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