Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM54 ENSECAG00000001386

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Description

tripartite motif containing 54 [Source:VGNC Symbol;Acc:VGNC:24515]

Location

Primary_assembly 15: 69,946,093-69,976,774 reverse strand.

EquCab3.0:CM009162.1

About this gene

This gene has 5 transcripts (splice variants), 149 orthologues and 78 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000002185.4	TRIM54-201	1671	375aa	ENSECAP00000001549.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6ULR5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000148681.1	TRIM54-205	12285	366aa	ENSECAP00000068566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S136	-
ENSECAT00000140538.1	TRIM54-203	3687	357aa	ENSECAP00000072498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SC80	-
ENSECAT00000135793.1	TRIM54-202	3555	366aa	ENSECAP00000076771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S136	-
ENSECAT00000084874.1	TRIM54-204	3552	365aa	ENSECAP00000071281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S8V7	-

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Gene tree

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