Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTCD1 ENSECAG00000016617

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Description

pentatricopeptide repeat domain 1 [Source:VGNC Symbol;Acc:VGNC:110121]

Location

Primary_assembly 13: 6,646,579-6,667,585 reverse strand.

EquCab3.0:CM009160.1

About this gene

This gene has 5 transcripts (splice variants), 190 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000103101.1	PTCD1-202	7376	751aa	ENSECAP00000074150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SJH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000070661.2	PTCD1-203	9680	674aa	ENSECAP00000051651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PTQ0	-
ENSECAT00000017663.3	PTCD1-201	3604	688aa	ENSECAP00000014360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YHC6	-
ENSECAT00000068738.2	PTCD1-204	3485	676aa	ENSECAP00000052604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PW46	-
ENSECAT00000062233.2	PTCD1-205	3477	684aa	ENSECAP00000031312.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L1R1	-

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Orthologues

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