Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHD2 ENSECAG00000029185

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Description

chromodomain helicase DNA binding protein 2 [Source:VGNC Symbol;Acc:VGNC:16484]

Location

Primary_assembly 1: 99,976,160-100,087,934 forward strand.

EquCab3.0:CM009148.1

About this gene

This gene has 7 transcripts (splice variants), 219 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000103912.1	CHD2-203	12819	1841aa	ENSECAP00000089884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TTW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000066525.2	CHD2-207	18330	1790aa	ENSECAP00000051069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PTG0	-
ENSECAT00000091699.1	CHD2-202	5389	1678aa	ENSECAP00000089725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TN90	-
ENSECAT00000025596.4	CHD2-204	5159	1665aa	ENSECAP00000021298.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Y8P1	-
ENSECAT00000047373.3	CHD2-205	5132	1679aa	ENSECAP00000045433.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LSA9	-
ENSECAT00000107420.1	CHD2-206	5113	1667aa	ENSECAP00000062987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RMD6	-
ENSECAT00000120374.1	CHD2-201	2971	49aa	ENSECAP00000068305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RWX0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data