Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RRP9 ENSECAG00000024543

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Description

ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:VGNC Symbol;Acc:VGNC:22591]

Location

Primary_assembly 16: 37,216,861-37,269,981 forward strand.

EquCab3.0:CM009163.1

About this gene

This gene has 10 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000141569.1	RRP9-207	2307	726aa	ENSECAP00000060751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RGG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000072149.2	RRP9-202	2040	456aa	ENSECAP00000047066.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PFA4	-
ENSECAT00000026188.3	RRP9-203	1857	395aa	ENSECAP00000021828.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XLG7	-
ENSECAT00000082359.1	RRP9-201	1848	392aa	ENSECAP00000058959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R4H0	-
ENSECAT00000026482.4	RRP9-204	1823	477aa	ENSECAP00000022094.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S650	-
ENSECAT00000009032.4	RRP9-206	1783	570aa	ENSECAP00000006824.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RPC7	-
ENSECAT00000107519.1	RRP9-209	1688	466aa	ENSECAP00000057781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R7R1	-
ENSECAT00000085302.1	RRP9-210	1623	499aa	ENSECAP00000073181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SG66	-
ENSECAT00000123572.1	RRP9-208	1558	456aa	ENSECAP00000072824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SDA5	-
ENSECAT00000121035.1	RRP9-205	1277	375aa	ENSECAP00000067845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RVK6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data