Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POP1 ENSECAG00000024236

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Description

POP1 homolog, ribonuclease P/MRP subunit [Source:VGNC Symbol;Acc:VGNC:21697]

Location

Primary_assembly 9: 45,934,504-45,968,596 forward strand.

EquCab3.0:CM009156.1

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000026111.3	POP1-202	4092	1029aa	ENSECAP00000021759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YG28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000132052.1	POP1-201	4200	1005aa	ENSECAP00000082401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T5M7	-
ENSECAT00000085162.1	POP1-203	3807	934aa	ENSECAP00000076324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SJR4	-
ENSECAT00000111402.1	POP1-204	3780	925aa	ENSECAP00000087864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TL34	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data