Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RFC1 ENSECAG00000024126

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Description

replication factor C subunit 1 [Source:VGNC Symbol;Acc:VGNC:22318]

Location

Primary_assembly 3: 90,056,441-90,135,935 forward strand.

EquCab3.0:CM009150.1

About this gene

This gene has 7 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000048449.3	RFC1-207	4803	1142aa	ENSECAP00000026715.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H1D7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000049187.3	RFC1-205	4510	1049aa	ENSECAP00000027238.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H297	-
ENSECAT00000035799.3	RFC1-206	4501	1046aa	ENSECAP00000037767.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LCJ1	-
ENSECAT00000145668.1	RFC1-201	592	119aa	ENSECAP00000065032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RTC2	-
ENSECAT00000091766.1	RFC1-203	551	118aa	ENSECAP00000082559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T8E8	-
ENSECAT00000131890.1	RFC1-202	550	125aa	ENSECAP00000072274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SDM7	-
ENSECAT00000111689.1	RFC1-204	529	134aa	ENSECAP00000082871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T3L2	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data