Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NSMCE1 ENSECAG00000024006

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Description

NSE1 homolog, SMC5-SMC6 complex component [Source:VGNC Symbol;Acc:VGNC:20905]

Location

Primary_assembly 13: 21,910,609-21,979,113 forward strand.

EquCab3.0:CM009160.1

About this gene

This gene has 8 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000105850.1	NSMCE1-202	1262	332aa	ENSECAP00000085330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TAM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000115451.1	NSMCE1-208	3386	277aa	ENSECAP00000065473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RUI7	-
ENSECAT00000138670.1	NSMCE1-204	2011	303aa	ENSECAP00000063747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RLU2	-
ENSECAT00000092926.1	NSMCE1-206	1378	271aa	ENSECAP00000084503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TDV5	-
ENSECAT00000128158.1	NSMCE1-203	1121	254aa	ENSECAP00000079841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T0R7	-
ENSECAT00000053965.3	NSMCE1-207	1065	274aa	ENSECAP00000025511.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GY48	-
ENSECAT00000025798.3	NSMCE1-205	1055	277aa	ENSECAP00000021478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YYW6	-
ENSECAT00000036004.2	NSMCE1-201	962	260aa	ENSECAP00000029486.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H8C9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data