Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPRTN ENSECAG00000023916

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Description

SprT-like N-terminal domain [Source:VGNC Symbol;Acc:VGNC:23542]

Location

Primary_assembly 1: 80,538,770-80,556,469 reverse strand.

EquCab3.0:CM009148.1

About this gene

This gene has 3 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000083648.1	SPRTN-203	8522	677aa	ENSECAP00000065532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RUK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000067070.2	SPRTN-202	3435	445aa	ENSECAP00000049801.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PNG7	-
ENSECAT00000025671.4	SPRTN-201	1882	492aa	ENSECAP00000021366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YDW3	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data