Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TARBP1 ENSECAG00000023673

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Description

TAR (HIV-1) RNA binding protein 1 [Source:UniProtKB Gene Name;Acc:F7C877]

Location

Primary_assembly 1: 77,731,098-77,815,912 forward strand.

EquCab3.0:CM009148.1

About this gene

This gene has 3 transcripts (splice variants), 200 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000025393.3	TARBP1-201	5403	1615aa	ENSECAP00000021121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7C877	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000054177.2	TARBP1-202	5331	1591aa	ENSECAP00000035563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L8Q0	-
ENSECAT00000046233.3	TARBP1-203	5316	1586aa	ENSECAP00000027483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H2T7	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data