Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GATA6 ENSECAG00000023279

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Description

GATA binding protein 6 [Source:VGNC Symbol;Acc:VGNC:58689]

Location

Primary_assembly 8: 42,553,851-42,679,258 reverse strand.

EquCab3.0:CM009155.1

About this gene

This gene has 4 transcripts (splice variants), 190 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000030724.2	GATA6-201	3443	598aa	ENSECAP00000042692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I5Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000057415.3	GATA6-204	4248	540aa	ENSECAP00000040778.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HZR3	-
ENSECAT00000024884.3	GATA6-202	3487	593aa	ENSECAP00000020690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6V1N7	-
ENSECAT00000058922.3	GATA6-203	2024	546aa	ENSECAP00000034974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HK47	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data