Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMG20A ENSECAG00000022516

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Description

high mobility group 20A [Source:UniProtKB Gene Name;Acc:A0A5F5PFM9]

Location

Primary_assembly 1: 118,974,022-119,064,565 forward strand.

EquCab3.0:CM009148.1

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000116658.1	HMG20A-201	3732	373aa	ENSECAP00000065006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RT31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000070045.2	HMG20A-203	3803	345aa	ENSECAP00000047245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PFM9	-
ENSECAT00000024020.4	HMG20A-202	3486	327aa	ENSECAP00000019933.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B7Y3	-
ENSECAT00000139381.1	HMG20A-205	2980	326aa	ENSECAP00000068478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S2V6	-
ENSECAT00000121188.1	HMG20A-204	2016	314aa	ENSECAP00000087892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TNG6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data