Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SH3RF1 ENSECAG00000021240

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Description

SH3 domain containing ring finger 1 [Source:VGNC Symbol;Acc:VGNC:22947]

Location

Primary_assembly 2: 66,322,528-66,506,747 forward strand.

EquCab3.0:CM009149.1

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000148099.1	SH3RF1-204	5465	897aa	ENSECAP00000082691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T6G5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000092018.1	SH3RF1-202	5778	881aa	ENSECAP00000090518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TTX4	-
ENSECAT00000136052.1	SH3RF1-206	4943	834aa	ENSECAP00000058046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R8F8	-
ENSECAT00000144739.1	SH3RF1-203	4483	849aa	ENSECAP00000063368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RNR6	-
ENSECAT00000037814.2	SH3RF1-201	2815	845aa	ENSECAP00000026752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H164	-
ENSECAT00000022853.4	SH3RF1-205	2774	854aa	ENSECAP00000018908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R887	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data