Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMU1 ENSECAG00000021146

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Description

SMU1 DNA replication regulator and spliceosomal factor [Source:VGNC Symbol;Acc:VGNC:23362]

Location

Primary_assembly 23: 49,331,116-49,359,632 reverse strand.

EquCab3.0:CM009170.1

About this gene

This gene has 5 transcripts (splice variants) and 269 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000115357.1	SMU1-202	3238	501aa	ENSECAP00000066193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RWK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000033670.2	SMU1-201	2711	485aa	ENSECAP00000033549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L5C8	-
ENSECAT00000107180.1	SMU1-204	2489	474aa	ENSECAP00000071315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S5A6	-
ENSECAT00000022765.3	SMU1-203	1901	473aa	ENSECAP00000018827.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QY78	-
ENSECAT00000112134.1	SMU1-205	1782	501aa	ENSECAP00000066731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RVU7	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data