Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX2 ENSECAG00000021123

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Description

paired box 2 [Source:VGNC Symbol;Acc:VGNC:21176]

Location

Primary_assembly 1: 29,222,908-29,312,819 reverse strand.

EquCab3.0:CM009148.1

About this gene

This gene has 4 transcripts (splice variants), 254 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000022725.3	PAX2-201	4331	497aa	ENSECAP00000018795.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6WFT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000106283.1	PAX2-203	7197	398aa	ENSECAP00000070570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S359	-
ENSECAT00000055140.3	PAX2-202	5507	413aa	ENSECAP00000031563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L250	-
ENSECAT00000063761.3	PAX2-204	3988	417aa	ENSECAP00000023302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2KJE9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data