Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HBP1 ENSECAG00000020969

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Description

HMG-box transcription factor 1 [Source:VGNC Symbol;Acc:VGNC:18704]

Location

Primary_assembly 4: 7,176,564-7,241,120 forward strand.

EquCab3.0:CM009151.1

About this gene

This gene has 7 transcripts (splice variants) and 266 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000126879.1	HBP1-203	3592	574aa	ENSECAP00000086534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TIV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000147768.1	HBP1-201	5114	493aa	ENSECAP00000085520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TGQ4	-
ENSECAT00000135741.1	HBP1-204	4839	471aa	ENSECAP00000064390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RRL2	-
ENSECAT00000104072.1	HBP1-206	4747	564aa	ENSECAP00000072776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SF16	-
ENSECAT00000042676.3	HBP1-205	3068	547aa	ENSECAP00000035098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HM85	-
ENSECAT00000022557.4	HBP1-202	2964	519aa	ENSECAP00000018647.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6UCJ2	-
ENSECAT00000059674.2	HBP1-207	2870	546aa	ENSECAP00000026013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GYF0	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data