Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TFCP2 ENSECAG00000020650

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Description

transcription factor CP2 [Source:VGNC Symbol;Acc:VGNC:24035]

Location

Primary_assembly 6: 69,375,399-69,432,257 reverse strand.

EquCab3.0:CM009153.1

About this gene

This gene has 8 transcripts (splice variants), 219 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000107336.1	TFCP2-207	4302	533aa	ENSECAP00000077443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0ST73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000126499.1	TFCP2-208	12445	479aa	ENSECAP00000079909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SY61	-
ENSECAT00000136675.1	TFCP2-206	4415	467aa	ENSECAP00000079513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SXC3	-
ENSECAT00000143389.1	TFCP2-202	3709	470aa	ENSECAP00000064195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RJU2	-
ENSECAT00000142681.1	TFCP2-203	3615	431aa	ENSECAP00000088481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TN74	-
ENSECAT00000071577.2	TFCP2-204	3598	424aa	ENSECAP00000054363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5Q0D0	-
ENSECAT00000022302.3	TFCP2-205	3446	530aa	ENSECAP00000018420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6TYZ0	-
ENSECAT00000035797.3	TFCP2-201	2434	450aa	ENSECAP00000031695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L2C8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data