Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BPTF ENSECAG00000019916

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Description

bromodomain PHD finger transcription factor [Source:VGNC Symbol;Acc:VGNC:15874]

Location

Primary_assembly 11: 14,606,804-14,779,359 forward strand.

EquCab3.0:CM009158.1

About this gene

This gene has 7 transcripts (splice variants), 288 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000031321.3	BPTF-204	10512	3110aa	ENSECAP00000042887.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IAK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000064324.3	BPTF-206	11119	2474aa	ENSECAP00000029061.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H788	-
ENSECAT00000065470.3	BPTF-202	10097	2893aa	ENSECAP00000033788.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HGS9	-
ENSECAT00000051426.3	BPTF-205	9975	2931aa	ENSECAP00000025305.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2KPT8	-
ENSECAT00000053680.3	BPTF-203	9523	2773aa	ENSECAP00000023393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GT12	-
ENSECAT00000059295.2	BPTF-207	8543	2802aa	ENSECAP00000037190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HQ40	-
ENSECAT00000021547.4	BPTF-201	8495	2709aa	ENSECAP00000017752.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DCJ8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data