Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GTF2IRD1 ENSECAG00000019745

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Description

GTF2I repeat domain containing 1 [Source:VGNC Symbol;Acc:VGNC:18642]

Location

Primary_assembly 13: 12,205,006-12,315,745 forward strand.

EquCab3.0:CM009160.1

About this gene

This gene has 6 transcripts (splice variants), 195 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000021684.4	GTF2IRD1-203	3252	1001aa	ENSECAP00000017872.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7C947	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000052085.3	GTF2IRD1-205	5527	952aa	ENSECAP00000031270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HB08	-
ENSECAT00000108777.1	GTF2IRD1-202	4595	917aa	ENSECAP00000087817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TNA0	-
ENSECAT00000052138.2	GTF2IRD1-206	3102	960aa	ENSECAP00000043207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2IBK2	-
ENSECAT00000021611.4	GTF2IRD1-204	2925	892aa	ENSECAP00000017808.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CPH2	-
ENSECAT00000134523.1	GTF2IRD1-201	2918	910aa	ENSECAP00000074680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SL08	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data