Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KDM1A ENSECAG00000019669

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Description

lysine demethylase 1A [Source:VGNC Symbol;Acc:VGNC:19331]

Location

Primary_assembly 2: 31,882,729-31,940,225 reverse strand.

EquCab3.0:CM009149.1

About this gene

This gene has 6 transcripts (splice variants), 215 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000021147.4	KDM1A-201	3566	876aa	ENSECAP00000017401.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DIL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000070616.2	KDM1A-202	3320	794aa	ENSECAP00000048041.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PI73	-
ENSECAT00000021154.3	KDM1A-203	3308	790aa	ENSECAP00000017408.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DIH9	-
ENSECAT00000113597.1	KDM1A-204	3251	771aa	ENSECAP00000072475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SEN7	-
ENSECAT00000108038.1	KDM1A-205	3125	729aa	ENSECAP00000071140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S4S5	-
ENSECAT00000091058.1	KDM1A-206	2990	684aa	ENSECAP00000062739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RFM4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data