Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FXN ENSECAG00000019174

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Description

frataxin [Source:VGNC Symbol;Acc:VGNC:18162]

Location

Primary_assembly 23: 20,935,551-20,965,296 reverse strand.

EquCab3.0:CM009170.1

About this gene

This gene has 4 transcripts (splice variants), 222 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000059654.2	FXN-203	2198	223aa	ENSECAP00000031333.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HCE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000099020.1	FXN-201	2151	208aa	ENSECAP00000074279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SJB6	-
ENSECAT00000145069.1	FXN-202	1967	138aa	ENSECAP00000089376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TQV7	-
ENSECAT00000020287.3	FXN-204	1533	211aa	ENSECAP00000016646.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B0Q7	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data