Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: WDR48 ENSECAG00000018492

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Description

WD repeat domain 48 [Source:VGNC Symbol;Acc:VGNC:25002]

Location

Primary_assembly 16: 47,863,910-47,909,289 reverse strand.

EquCab3.0:CM009163.1

About this gene

This gene has 8 transcripts (splice variants) and 229 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000119754.1	WDR48-208	4567	728aa	ENSECAP00000073957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SGB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000118636.1	WDR48-202	4154	695aa	ENSECAP00000071819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SCC9	-
ENSECAT00000129510.1	WDR48-203	4073	699aa	ENSECAP00000058203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R2A2	-
ENSECAT00000077199.2	WDR48-206	4043	698aa	ENSECAP00000046876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PET0	-
ENSECAT00000020117.3	WDR48-205	4021	698aa	ENSECAP00000016499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6ZZI8	-
ENSECAT00000038634.2	WDR48-201	4004	567aa	ENSECAP00000044093.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LPN7	-
ENSECAT00000113998.1	WDR48-204	3955	666aa	ENSECAP00000075635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SL95	-
ENSECAT00000116662.1	WDR48-207	3884	645aa	ENSECAP00000073078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SAA8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data