Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LRSAM1 ENSECAG00000017934

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Description

leucine rich repeat and sterile alpha motif containing 1 [Source:VGNC Symbol;Acc:VGNC:19809]

Location

Primary_assembly 25: 31,514,239-31,554,981 forward strand.

EquCab3.0:CM009172.1

About this gene

This gene has 7 transcripts (splice variants) and 190 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000147670.1	LRSAM1-202	3179	740aa	ENSECAP00000069291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S374	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000095963.1	LRSAM1-207	9920	664aa	ENSECAP00000070235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S298	-
ENSECAT00000019370.4	LRSAM1-206	3145	714aa	ENSECAP00000015849.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SK65	-
ENSECAT00000085455.1	LRSAM1-203	3059	700aa	ENSECAP00000082415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T297	-
ENSECAT00000019355.4	LRSAM1-201	3041	717aa	ENSECAP00000015838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SKN5	-
ENSECAT00000117072.1	LRSAM1-205	2974	669aa	ENSECAP00000089519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TSW9	-
ENSECAT00000106524.1	LRSAM1-204	2972	671aa	ENSECAP00000064040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RJC9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data