Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCAPER ENSECAG00000017272

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Description

S-phase cyclin A associated protein in the ER [Source:VGNC Symbol;Acc:VGNC:22714]

Location

Primary_assembly 1: 117,976,410-118,465,952 reverse strand.

EquCab3.0:CM009148.1

About this gene

This gene has 9 transcripts (splice variants) and 207 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000016713.4	SCAPER-205	5075	1484aa	ENSECAP00000013511.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6UTC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000050479.3	SCAPER-209	5077	1338aa	ENSECAP00000034950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HJS6	-
ENSECAT00000032314.3	SCAPER-202	4823	1401aa	ENSECAP00000035919.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HRN3	-
ENSECAT00000028952.3	SCAPER-204	4810	1413aa	ENSECAP00000022871.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QSV1	-
ENSECAT00000060578.3	SCAPER-206	4763	1380aa	ENSECAP00000034669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HJ11	-
ENSECAT00000050542.3	SCAPER-207	4673	1350aa	ENSECAP00000034591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L730	-
ENSECAT00000046088.3	SCAPER-208	4631	1336aa	ENSECAP00000037791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HWS3	-
ENSECAT00000018533.4	SCAPER-201	4478	1315aa	ENSECAP00000015122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SAJ1	-
ENSECAT00000043256.3	SCAPER-203	4355	1299aa	ENSECAP00000042431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LLC8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data