Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NOD2 ENSECAG00000017005

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Description

nucleotide binding oligomerization domain containing 2 [Source:VGNC Symbol;Acc:VGNC:20796]

Location

Primary_assembly 3: 3,689,755-3,726,060 forward strand.

EquCab3.0:CM009150.1

About this gene

This gene has 6 transcripts (splice variants), 165 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000018435.3	NOD2-201	5027	1078aa	ENSECAP00000015042.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PKU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000050411.3	NOD2-202	7261	1013aa	ENSECAP00000041104.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I206	-
ENSECAT00000141674.1	NOD2-203	7177	985aa	ENSECAP00000057817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R865	-
ENSECAT00000128139.1	NOD2-204	7177	985aa	ENSECAP00000057532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R7B9	-
ENSECAT00000120028.1	NOD2-205	7093	957aa	ENSECAP00000085157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TDH9	-
ENSECAT00000124470.1	NOD2-206	7009	929aa	ENSECAP00000088416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TN15	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data