Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASZ1 ENSECAG00000014410

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Description

castor zinc finger 1 [Source:VGNC Symbol;Acc:VGNC:50674]

Location

Primary_assembly 2: 40,865,754-40,982,412 forward strand.

EquCab3.0:CM009149.1

About this gene

This gene has 3 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000015190.4	CASZ1-201	8270	1883aa	ENSECAP00000012190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7C1Z0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000073248.2	CASZ1-202	8337	1859aa	ENSECAP00000052600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PVS7	-
ENSECAT00000053880.3	CASZ1-203	8037	1759aa	ENSECAP00000037574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HRG8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data