Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: NPLOC4 ENSECAG00000012622

.

Description

NPL4 homolog, ubiquitin recognition factor [Source:VGNC Symbol;Acc:VGNC:20840]

Location

Primary_assembly 11: 1,514,140-1,584,851 forward strand.

EquCab3.0:CM009158.1

About this gene

This gene has 10 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000124962.1	NPLOC4-207	4707	653aa	ENSECAP00000083578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T901	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000083429.1	NPLOC4-201	5277	597aa	ENSECAP00000068654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S3M6	-
ENSECAT00000108830.1	NPLOC4-204	4816	607aa	ENSECAP00000068773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S3Q5	-
ENSECAT00000013577.3	NPLOC4-205	4731	584aa	ENSECAP00000010788.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SFE1	-
ENSECAT00000081635.1	NPLOC4-206	4716	579aa	ENSECAP00000056318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R1K9	-
ENSECAT00000127836.1	NPLOC4-208	4686	569aa	ENSECAP00000078117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0ST36	-
ENSECAT00000122082.1	NPLOC4-209	4635	552aa	ENSECAP00000075347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SMX7	-
ENSECAT00000058563.3	NPLOC4-210	4623	548aa	ENSECAP00000025922.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GY98	-
ENSECAT00000112128.1	NPLOC4-203	4381	634aa	ENSECAP00000065088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RMF8	-
ENSECAT00000118283.1	NPLOC4-202	4319	604aa	ENSECAP00000083245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TAC7	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data