Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SPART ENSECAG00000012173

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Description

spartin [Source:VGNC Symbol;Acc:VGNC:23480]

Location

Primary_assembly 17: 15,107,385-15,143,348 reverse strand.

EquCab3.0:CM009164.1

About this gene

This gene has 5 transcripts (splice variants) and 284 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000085703.1	SPART-205	4610	686aa	ENSECAP00000064327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RP28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000101439.1	SPART-203	3574	667aa	ENSECAP00000087158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TFW6	-
ENSECAT00000081164.1	SPART-202	3498	635aa	ENSECAP00000078201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0STK9	-
ENSECAT00000098316.1	SPART-204	3379	602aa	ENSECAP00000085076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TD68	-
ENSECAT00000012715.3	SPART-201	3368	676aa	ENSECAP00000010042.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SDS3	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data