Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USPL1 ENSECAG00000011889

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Description

ubiquitin specific peptidase like 1 [Source:VGNC Symbol;Acc:VGNC:24857]

Location

Primary_assembly 17: 9,970,398-10,004,593 forward strand.

EquCab3.0:CM009164.1

About this gene

This gene has 5 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000057924.3	USPL1-202	4095	1124aa	ENSECAP00000032067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HEP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000071899.2	USPL1-205	4656	1066aa	ENSECAP00000051718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PT96	-
ENSECAT00000141809.1	USPL1-201	4400	1037aa	ENSECAP00000063499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RHT3	-
ENSECAT00000012309.4	USPL1-203	3990	1060aa	ENSECAP00000009715.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BF90	-
ENSECAT00000043222.3	USPL1-204	3978	1056aa	ENSECAP00000024100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GTX4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data