Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RNF180 ENSECAG00000011642

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Description

ring finger protein 180 [Source:VGNC Symbol;Acc:VGNC:22455]

Location

Primary_assembly 21: 9,738,873-10,071,161 reverse strand.

EquCab3.0:CM009168.1

About this gene

This gene has 7 transcripts (splice variants), 228 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000088459.1	RNF180-204	3386	625aa	ENSECAP00000086883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TIA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000112286.1	RNF180-207	3689	602aa	ENSECAP00000065023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RM91	-
ENSECAT00000142599.1	RNF180-205	3308	606aa	ENSECAP00000073030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SDQ4	-
ENSECAT00000130103.1	RNF180-203	3301	545aa	ENSECAP00000065889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RPS6	-
ENSECAT00000047517.2	RNF180-202	3266	592aa	ENSECAP00000031050.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HCM2	-
ENSECAT00000051907.3	RNF180-201	2027	545aa	ENSECAP00000044281.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I843	-
ENSECAT00000012037.4	RNF180-206	1747	560aa	ENSECAP00000009469.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BAG7	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data