Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NSD1 ENSECAG00000011291

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Description

nuclear receptor binding SET domain protein 1 [Source:VGNC Symbol;Acc:VGNC:49309]

Location

Primary_assembly 14: 4,125,145-4,287,067 reverse strand.

EquCab3.0:CM009161.1

About this gene

This gene has 5 transcripts (splice variants), 306 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000012000.4	NSD1-205	8074	2597aa	ENSECAP00000009434.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BGP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000148248.1	NSD1-204	9018	2444aa	ENSECAP00000071364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SB25	-
ENSECAT00000106651.1	NSD1-203	8979	2431aa	ENSECAP00000082044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T179	-
ENSECAT00000123058.1	NSD1-201	3831	327aa	ENSECAP00000082700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T346	-
ENSECAT00000096014.1	NSD1-202	2660	350aa	ENSECAP00000079068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SVS3	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data