Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: IFT172 ENSECAG00000010877

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Description

intraflagellar transport 172 [Source:VGNC Symbol;Acc:VGNC:18960]

Location

Primary_assembly 15: 69,820,130-69,853,068 forward strand.

EquCab3.0:CM009162.1

About this gene

This gene has 6 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000037459.3	IFT172-202	5395	1760aa	ENSECAP00000031811.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HE13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000012176.3	IFT172-203	6130	1578aa	ENSECAP00000009597.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7AIL1	-
ENSECAT00000012148.3	IFT172-206	5240	1717aa	ENSECAP00000009572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7AJB3	-
ENSECAT00000031398.3	IFT172-205	5219	1710aa	ENSECAP00000031512.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2L210	-
ENSECAT00000092375.1	IFT172-204	2751	123aa	ENSECAP00000064775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RSH4	-
ENSECAT00000145389.1	IFT172-201	528	125aa	ENSECAP00000089009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0TL54	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data