Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIT1 ENSECAG00000010597

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Description

tRNA isopentenyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:24531]

Location

Primary_assembly 2: 18,209,299-18,289,397 forward strand.

EquCab3.0:CM009149.1

About this gene

This gene has 10 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000011338.3	TRIT1-205	2325	529aa	ENSECAP00000008855.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DFK9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000084462.1	TRIT1-209	2824	437aa	ENSECAP00000058146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R8R5	-
ENSECAT00000126179.1	TRIT1-206	2722	507aa	ENSECAP00000086599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0THR5	-
ENSECAT00000057964.3	TRIT1-208	2691	313aa	ENSECAP00000045048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2LRL8	-
ENSECAT00000144905.1	TRIT1-210	2174	456aa	ENSECAP00000081961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T5X8	-
ENSECAT00000130637.1	TRIT1-207	2122	460aa	ENSECAP00000063650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RI85	-
ENSECAT00000143929.1	TRIT1-201	2089	272aa	ENSECAP00000057978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0R1L9	-
ENSECAT00000073210.2	TRIT1-202	1931	441aa	ENSECAP00000052976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PWU7	-
ENSECAT00000062105.3	TRIT1-204	1887	385aa	ENSECAP00000029749.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H7C6	-
ENSECAT00000066748.2	TRIT1-203	1857	316aa	ENSECAP00000049399.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PNF5	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data