Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB2 ENSECAG00000010043

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Description

SATB homeobox 2 [Source:VGNC Symbol;Acc:VGNC:22701]

Location

Primary_assembly 18: 74,377,561-74,558,910 reverse strand.

EquCab3.0:CM009165.1

About this gene

This gene has 4 transcripts (splice variants), 264 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000073554.2	SATB2-203	6995	733aa	ENSECAP00000059820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0RDT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000040218.3	SATB2-204	11081	126aa	ENSECAP00000042930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2I522	-
ENSECAT00000132809.1	SATB2-201	4211	718aa	ENSECAP00000081810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0T3R6	-
ENSECAT00000032451.3	SATB2-202	3631	674aa	ENSECAP00000025115.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PZN4	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data