Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: CLOCK ENSECAG00000006331

.

Description

clock circadian regulator [Source:VGNC Symbol;Acc:VGNC:16627]

Location

Primary_assembly 3: 78,957,876-79,032,450 forward strand.

EquCab3.0:CM009150.1

About this gene

This gene has 3 transcripts (splice variants), 267 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000007476.2	CLOCK-202	11328	847aa	ENSECAP00000005465.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7DDS7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000137970.1	CLOCK-203	11236	800aa	ENSECAP00000069046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0S2G8	-
ENSECAT00000070046.2	CLOCK-201	4145	845aa	ENSECAP00000049799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PPL8	-

.

Breeds

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data