Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLDN12 ENSECAG00000005767

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Description

claudin 12 [Source:VGNC Symbol;Acc:VGNC:16584]

Location

Primary_assembly 4: 34,423,690-34,442,979 forward strand.

EquCab3.0:CM009151.1

About this gene

This gene has 10 transcripts (splice variants) and 189 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000118328.1	CLDN12-210	10294	244aa	ENSECAP00000068224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000129171.1	CLDN12-206	9017	244aa	ENSECAP00000087624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000147737.1	CLDN12-209	8169	244aa	ENSECAP00000074415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000083664.1	CLDN12-208	7938	244aa	ENSECAP00000078424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000127198.1	CLDN12-207	7188	244aa	ENSECAP00000063808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000097046.1	CLDN12-201	6432	244aa	ENSECAP00000090392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000080468.1	CLDN12-202	5598	244aa	ENSECAP00000070737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000088430.1	CLDN12-204	5116	244aa	ENSECAP00000058897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000141098.1	CLDN12-205	4066	244aa	ENSECAP00000080503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-
ENSECAT00000005680.3	CLDN12-203	3642	244aa	ENSECAP00000004009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B304	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data