Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NHLRC1 ENSECAG00000002623

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Description

NHL repeat containing E3 ubiquitin protein ligase 1 [Source:VGNC Symbol;Acc:VGNC:20731]

Location

Primary_assembly 20: 17,499,214-17,510,295 reverse strand.

EquCab3.0:CM009167.1

About this gene

This gene has 3 transcripts (splice variants) and 165 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000088413.1	NHLRC1-203	2362	395aa	ENSECAP00000076414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SK03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000148109.1	NHLRC1-201	2348	395aa	ENSECAP00000077801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0SK03	-
ENSECAT00000002485.4	NHLRC1-202	1212	360aa	ENSECAP00000001770.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6V8J9	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data