Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOCS3 ENSECAG00000001249

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Description

suppressor of cytokine signaling 3 [Source:VGNC Symbol;Acc:VGNC:58582]

Location

Primary_assembly 11: 4,190,666-4,211,421 forward strand.

EquCab3.0:CM009158.1

About this gene

This gene has 6 transcripts (splice variants), 258 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000140468.1	SOCS3-206	10894	229aa	ENSECAP00000056224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CXY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000122866.1	SOCS3-203	9843	229aa	ENSECAP00000078182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CXY7	-
ENSECAT00000120965.1	SOCS3-204	8697	229aa	ENSECAP00000057856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CXY7	-
ENSECAT00000130505.1	SOCS3-205	3580	229aa	ENSECAP00000072397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CXY7	-
ENSECAT00000119471.1	SOCS3-202	2736	229aa	ENSECAP00000083368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CXY7	-
ENSECAT00000001789.3	SOCS3-201	2716	229aa	ENSECAP00000001322.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CXY7	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data